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DOI: | 10.1007/s00122-015-2556-3 |
Web URL(s): | https://link.springer.com/article/10.1007/s00122-015-2556-3 Last checked: 10/06/2017 Access conditions: Item is within a limited-access website https://link.springer.com/content/pdf/10.1007%2Fs00122-015-2556-3.pdf Last checked: 10/06/2017 Requires: PDF Reader Access conditions: Item is within a limited-access website |
Publication Type:
| Refereed |
Author(s): | Blackmore, T.;
Thomas, I.;
McMahon, R.;
Powell, W.;
Hegarty, M. |
Author Affiliation: | Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Gogerddan, Aberystwyth, Wales, UK |
Title: | Genetic-geographic correlation revealed across a broad European ecotypic sample of perennial ryegrass (Lolium perenne) using array-based SNP genotyping |
Source: | Theoretical and Applied Genetics. Vol. 128, No. 10, October 2015, p. 1917-1932. |
Publishing Information: | Berlin, Germany: Springer |
# of Pages: | 16 |
Related Web URL: | https://link.springer.com/article/10.1007/s00122-015-2556-3 Last checked: 10/09/2015 Notes: Abstract only |
Keywords: | TIC Keywords: Ecotypic variation; Genetic markers; Genetic variability; Lolium perenne; Regional variation
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Geographic Terms: | Europe |
Abstract/Contents: | "Grassland ecosystems are ubiquitous across temperate and tropical regions, totalling [totaling] 37 % of the terrestrial land cover of the planet, and thus represent a global resource for understanding local adaptations to environment. However, genomic resources for grass species (outside cereals) are relatively poor. The advent of next-generation DNA sequencing and high-density SNP genotyping platforms enables the development of dense marker assays for population genetics analyses and genome-wide association studies. A high-density SNP marker resource (Illumina Infinium assay) for perennial ryegrass (Lolium perenne) was created and validated in a broad ecotype collection of 716 individuals sampled from 90 sites across Europe. Genetic diversity within and between populations was assessed. A strong correlation of geographic origin to genetic structure was found using principal component analysis, with significant correlation to longitude and latitude (P < 0.001). The potential of this array as a resource for studies of germplasm diversity and identifying traits underpinning adaptive variation is highlighted." |
Language: | English |
References: | 56 |
Note: | Map Figures Tables Graphs |
| ASA/CSSA/SSSA Citation (Crop Science-Like - may be incomplete): Blackmore, T., I. Thomas, R. McMahon, W. Powell, and M. Hegarty. 2015. Genetic-geographic correlation revealed across a broad European ecotypic sample of perennial ryegrass (Lolium perenne) using array-based SNP genotyping. Theor. Appl. Genet. 128(10):p. 1917-1932. |
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| DOI: 10.1007/s00122-015-2556-3 |
| Web URL(s): https://link.springer.com/article/10.1007/s00122-015-2556-3 Last checked: 10/06/2017 Access conditions: Item is within a limited-access website https://link.springer.com/content/pdf/10.1007%2Fs00122-015-2556-3.pdf Last checked: 10/06/2017 Requires: PDF Reader Access conditions: Item is within a limited-access website |
| MSU catalog number: b2203373 |
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