Full TGIF Record # 271852
Item 1 of 1
DOI:10.2135/cropsci2015.08.0517
Web URL(s):https://dl.sciencesocieties.org/publications/cs/articles/56/3/1206
    Last checked: 05/20/2016
    Access conditions: Item is within a limited-access website
https://dl.sciencesocieties.org/publications/cs/pdfs/56/3/1206
    Last checked: 05/20/2016
    Requires: PDF Reader
    Access conditions: Item is within a limited-access website
Publication Type:
i
Refereed
Author(s):Tanaka, Hidenori; Hirakawa, Hideki; Muguerza, Melody; Hashiguchi, Masatsugu; Tabata, Satoshi; Akashi, Ryo; Sato, Shusei
Author Affiliation:Tanaka, Muguerza, Hashiguchi, and Akashi: Faculty of Agriculture, Univ. of Miyazaki, Miyazaki; Hirakawa, Tabata, and Sato: Kazusa DNA Research Institute, Kisarazu, Chiba; Sato: Graduate School of Life Sciences, Tohoku Univ., Aoba-ku, Sendai, Japan
Title:The complete chloroplast genome sequence of Zoysia matrella (L.) Merr.
Column Name:Genomics, molecular genetics & biotechnology - Note
Other records with the "Genomics, molecular genetics & biotechnology - Note" Column
Source:Crop Science. Vol. 56, No. 3, May/June 2016, p. 1206-1212.
Publishing Information:Madison, Wisconsin: Crop Science Society of America
# of Pages:7
Related Web URL:https://dl.sciencesocieties.org/publications/cs/abstracts/56/3/1206
    Last checked: 05/20/2016
    Notes: Abstract only
Keywords:TIC Keywords: Chloroplasts; Evolution; Gene mapping; Genetic analysis; Genetic code; Genetic structure; Genetic variability; Molecular genetics; Phylogenetic analysis; Zoysia matrella
Abstract/Contents:"Zoysia Willd. include one of the best-known turfgrasses worldwide owing to its adaptability in a wide range of environments and its tolerance to abiotic stresses including soil salinity, soil acidity, cold, drought, and heat. Here, we report the complete chloroplast genome sequence of Zoysia matrella (L.) Merr. obtained by a combination of 454 pyrosequencing and Sanger sequencing platforms. The entire chloroplast genome of Zoysia maps as a circular molecule of 135,810 bp built with a quadripartite organization: two inverted repeats (IRs) of 20,960 bp separated by a large single copy (LSC) sequence of 81,306 bp and a small single copy (SSC) sequence of 12,584 bp. The genome contains 131 unique genes, of which 20 are duplicated in the IRs. We identified a total of 42 simple sequence repeat (SSR) markers with ā‰„10 repeated nucleotides. Phylogenetic analysis revealed a close relationship between Zoysia and Neyraudia. This study identified genes, insertion-deletion (InDel), and SSR markers that may be useful in inferring evolutionary relationships at both the intra- and interspecific levels. Moreover, the Zoysia chloroplast genome sequence will be helpful in understanding phylogenetic and evolutionary relationships with other species in the Poaceae family and the Chloridoideae subfamily and will be valuable for biogenetic engineering, plant breeding, and ecological conservation."
Language:English
References:32
Note:Figures
Tables
ASA/CSSA/SSSA Citation (Crop Science-Like - may be incomplete):
Tanaka, H., H. Hirakawa, M. Muguerza, M. Hashiguchi, S. Tabata, R. Akashi, et al. 2016. The complete chloroplast genome sequence of Zoysia matrella (L.) Merr.. Crop Sci. 56(3):p. 1206-1212.
Fastlink to access this record outside TGIF: https://tic.msu.edu/tgif/flink?recno=271852
If there are problems with this record, send us feedback about record 271852.
Choices for finding the above item:
DOI: 10.2135/cropsci2015.08.0517
Web URL(s):
https://dl.sciencesocieties.org/publications/cs/articles/56/3/1206
    Last checked: 05/20/2016
    Access conditions: Item is within a limited-access website
https://dl.sciencesocieties.org/publications/cs/pdfs/56/3/1206
    Last checked: 05/20/2016
    Requires: PDF Reader
    Access conditions: Item is within a limited-access website
Find Item @ MSU
MSU catalog number: b2211522a
Find from within TIC:
   Digitally in TIC by record number.
Request through your local library's inter-library loan service (bring or send a copy of this TGIF record)